Import/Export 导入/导出格式

GenBank (.gb, .gbk)

MIME type: chemical/seq-na-genbank
GenBank molecular biology format.
Native format of the U.S. National Center for Biotechnology Information (NCBI) database.
Standard format for storing and exchanging annotated DNA sequences.
Plain text format.
Developed in 1982 as part of the NIH GenBank project.

Import supports all versions of the GenBank file format.

IMPORT AND EXPORT

Import["file.gb"] imports a DNA sequence from a GenBank file.

Import["file.gb"] returns a string representing the sequence stored in the file.

Import["file.gb", elem] imports the specified element from a GenBank file.

Import["file.gb", {elem, sub_a, sub_b, ...}] imports a subelement.

Import["file.gb", {{elem₁, elem₂, ...}}] imports multiple elements.

The import format can be specified with Import["file", "GenBank"] or Import["file", {"GenBank", elem, ...}].

See the reference pages for full general information on Import and Export.

ImportString supports the GenBank format.

ELEMENTS

General Import elements:

	"Elements"	list of elements and options available in this file
	"Rules"	full list of rules for each element and option
	"Options"	list of rules for options, properties, and settings

Data representation elements:

	"Features"	all sequence annotations, given as a list of rules
	"Sequence"	DNA or protein sequence as a string
	"Plaintext"	sequences as formatted text
	"Comment"	miscellaneous comments on sequence

Import uses the "Sequence" element by default for the GenBank format.

Metainformation elements:

	"Locus"	locus description
	"Definition"	GenBank file title
	"NCBIAccession"	NCBI accession number
	"NCBIAccessionVersion"	versioned NCBI accession number
	"GenBankID"	GenBank database identifier
	"Project"	name of the sequencing project
	"Keywords"	list of keywords
	"Organism"	source organism referenced in the file
	"Segment"	sequence segment, if divided into multiple GenBank files
	"Source"	source organism
	"Reference"	bibliographic reference, given as a list of rules
	"Comments"	comments stored in the file, given as a list of strings