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MATHEMATICA OVERVIEW

Graph Drawing

Introduction

Graph Theory Notations

Input Formats

Graph Drawing Algorithms

Spring Embedding

Spring-Electrical Embedding

High-Dimensional Embedding Algorithm

A Hierarchical Drawing Algorithm for Directed Graphs

Algorithms for Drawing Trees

Selecting the Appropriate Graph Drawing Function

References

General Graph Drawing

Options for GraphPlot and GraphPlot3D

DirectedEdges

EdgeLabeling

EdgeRenderingFunction

Method

MultiedgeStyle

PackingMethod

PlotRangePadding

PlotStyle

SelfLoopStyle

VertexCoordinateRules

VertexLabeling

VertexRenderingFunction

Common Suboptions of All Methods

Common Suboptions of the "SpringEmbedding" and "SpringElectricalEmbedding" Methods

"EnergyControl"

"InferentialDistance"

"MaxIterations"

"RandomSeed"

"RecursionMethod"

"StepControl"

"StepLength"

"Tolerance"

Method Suboptions of the "SpringElectricalEmbedding" Method

"Octree"

"RepulsiveForcePower"

Method Suboption of "HighDimensionalEmbedding"

"RefinementMethod"

Advanced Topics

Drawing a Graph to Fill up More Space

Improving Performance for Drawing Very Large Graphs

Extracting Vertex Coordinates from Output

Example Gallery

E. coli Transcription Networks

Data

Drawing the Network

Protein: An Oxidoreductase

Square Dielectric Waveguide

Social Network

Graphs from Words and Texts

Torus

References

TUTORIAL COLLECTION

Graph Drawing

Mathematics and Algorithms

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