As of Version 6.0, HiddenSurface -> False has been superseded by the setting PlotStyle -> FaceForm[].
Since Version 3.0 (released in 1996), HomeDirectory has been replaced by $HomeDirectory.
HTMLSave is superseded by Export[..., "HTML"] in Version 6.
As of Version 6.0, ImageRotated has been superseded by the "ImageTopOrientation" element specification.
Since Version 3.0 (released in 1996), LegendreType has been superseded by additional arguments to LegendreP and LegendreQ.
As of Version 6.0, LightSources has been superseded by settings for Lighting.
Since Version 3.0 (released in 1996), LinkOpen has been superseded by LinkCreate, LinkConnect, and LinkLaunch.
Literal
(Obsolete Mathematica Symbol) Since Version 3.0 (released in 1996), Literal has been superseded by HoldPattern.
As of Version 6.0, LongestMatch has been superseded by the pattern object Longest.
Since Version 5.0 (released in 2003), LUBackSubstitution has been superseded by LinearSolveFunction.