is an option for BioMolecule to determine how to fold an input peptide sequence.


BioMoleculeFoldingMethod
is an option for BioMolecule to determine how to fold an input peptide sequence.
Details

- BioMoleculeFoldingMethod should be either Automatic or "ESMFold" [more info].
- Typical settings include:
-
Automatic pick the folding method automatically "Remote" use the "ESMAtlas" service connection "Local" use a local neural network to fold the sequence {"Local",opt1val1,…} specify options for local folding - The following options are available when folding using a local network:
-
"Cycles" 4 number of times to pass the current output back to the model as input "Model" "V1" which model to use; should be "150M", "650M" or "V1" TargetDevice "CPU" the device on which to perform the folding - For local protein folding, a neural network will be downloaded, requiring approximately 30GB of space.
Examples
Basic Examples (2)
Create a BioMolecule from a BioSequence by folding the sequence:
See Also
History
Text
Wolfram Research (2024), BioMoleculeFoldingMethod, Wolfram Language function, https://reference.wolfram.com/language/ref/BioMoleculeFoldingMethod.html.
CMS
Wolfram Language. 2024. "BioMoleculeFoldingMethod." Wolfram Language & System Documentation Center. Wolfram Research. https://reference.wolfram.com/language/ref/BioMoleculeFoldingMethod.html.
APA
Wolfram Language. (2024). BioMoleculeFoldingMethod. Wolfram Language & System Documentation Center. Retrieved from https://reference.wolfram.com/language/ref/BioMoleculeFoldingMethod.html
BibTeX
@misc{reference.wolfram_2025_biomoleculefoldingmethod, author="Wolfram Research", title="{BioMoleculeFoldingMethod}", year="2024", howpublished="\url{https://reference.wolfram.com/language/ref/BioMoleculeFoldingMethod.html}", note=[Accessed: 18-August-2025]}
BibLaTeX
@online{reference.wolfram_2025_biomoleculefoldingmethod, organization={Wolfram Research}, title={BioMoleculeFoldingMethod}, year={2024}, url={https://reference.wolfram.com/language/ref/BioMoleculeFoldingMethod.html}, note=[Accessed: 18-August-2025]}