AnatomicalStructure

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Human anatomical structures, including body parts and organs.

Entity["AnatomicalStructure",name] or

represents an entity of type "AnatomicalStructure".

[prop]

gives the value of a specified property.

[{propi,}]

gives the value of a list of properties.

[prop,{qualivali,}]

gives the value of a specified property modified by qualifier rules quali->vali.

EntityClass["AnatomicalStructure",{propispeci,}]

represents a class of entities with values of propi defined by speci.

Sample Entities

Sample Entity Classes

Properties

  • Abbreviationabbreviation
    AdjacentJointCountadjacent joint count
    AdjacentJointsadjacent joints
    AdjacentStructuresadjacent structures
    AfferentVesselafferent vessel
    AlternateNamesalternate names
    AnatomicalGroupanatomical groups
    AnatomicalRegionanatomical regions
    AnatomicalSpaceanatomical spaces
    ArterialSupplyarterial supply
    ArticulatingBonesarticulating bones
    AssociatedCerebralLobeassociated cerebral lobe
    AssociatedCorticalAreaassociated cortical area
    AssociatedICDNineassociated ICD9
    AssociatedICDTenassociated ICD10
    AttachedMuscleCountattached muscle count
    AttachedMusclesattached muscles
    AttachedStructureattached structure
    Axonsaxons
    BilateralComponentsbilateral components
    BodyLocationImagebody location image
    BoneArticulationbone articulation
    BoneArticulationCountbone articulation count
    Branchesbranches
    CellSurfaceSpecializationcell surface specialization
    ConstitutionalPartsconstitutional parts
    Contentscontents
    ContextualizingEntitycontextualizing entity
    ContinuationBranchescontinuation branches
    ContinuousStructurescontinuous structures
    Dendritesdendrites
    Densitydensity
    Depthdepth
    DerivedStructuresderived structures
    DevelopmentalOrigindevelopmental origin
    Diameterdiameter
    DistallyContinuousStructuredistally continuous structure
    DividingStructuredividing structures
    EfferentVesselefferent vessel
    EnclosingCuboidenclosing cuboid
    EnclosingSphereenclosing sphere
    EnclosingSphereDiameterenclosing sphere diameter
    EnclosingSphereRadiusenclosing sphere radius
    ExternalStructureexternal structure
    FascicularArchitecturefascicular architecture
    Functionfunction
    FunctionalCategoriesfunctional categories
    GermOrigingerm origin
    Graphics3D3D graphic
    Graphics3DPrimitives3D graphic primitives
    Imageimage
    IncludedArteriesarteries
    IncludedBoneCountbone count
    IncludedBonesbones
    IncludedCartilagescartilages
    IncludedJointCountjoint count
    IncludedJointsjoints
    IncludedLigamentsligaments
    IncludedLymphaticVesselslymphatic vessels
    IncludedMuscleCountmuscle count
    IncludedMusclesmuscles
    IncludedNervesnerves
    IncludedOrganCountorgan count
    IncludedOrgansorgans
    IncludedTendonstendons
    IncludedVeinsveins
    Innervationsinnervations
    InputPathwayinput pathway
    InsertedMuscleCountinserted muscle count
    InsertedMusclesinserted muscles
    InternalStructureinternal structure
    LatinNameLatin name
    Lengthlength
    LymphaticDrainagelymphatic drainage
    LymphaticSourcelymphatic source
    Massmass
    Membersmembers
    MeshAreamesh area
    MeshRegionmesh region
    MeshVolumemesh volume
    MinimumCentroidSphereminimum centroid sphere
    MuscleActionaction
    MuscleAntagonistantagonist
    MuscleAttachmentSitesattachment sites
    MuscleInsertioninsertion
    MuscleOriginorigin
    Namename
    NearbyStructuresnearby structures
    NerveSupplynerve supply
    NeuronalInputneuronal input
    NeuronalOutputneuronal output
    Neuronsneurons
    OriginatedMuscleCountoriginated muscle count
    OriginatedMusclesoriginated muscles
    OutputPathwayoutput pathway
    PathwayComponentspathway components
    PathwayDestinationpathway destination
    PathwayDiagrampathway diagram
    PathwayDirectionpathway direction
    PathwayOriginpathway origin
    PathwayProjectionSidepathway projection side
    PrimaryInnervationsprimary innervations
    PrimarySegmentalSupplyprimary segmental supply
    ProximallyContinuousStructureproximally continuous structure
    ReceptorTypereceptor type
    Regionregion
    RegionalLocationHighlightedImageregional location highlighted image
    RegionalLocationImageregional location image
    RegionalPartsregional parts
    RegionBoundsregion bounds
    RegionCentroidregion centroid
    Rootroot
    SecondaryInnervationssecondary innervations
    SecondarySegmentalSupplysecondary segmental supply
    SegmentalSupplysegmental supply
    SensoryFiberTypesensory fiber type
    Shapeshape
    SiteOfDecussationsite of decussation
    SpinalNerveInnervationsspinal nerve innervations
    Stemstem
    Stimulusstimulus
    StructuralGroupstructural groups
    StructureTypestructure type
    Suppliessupplies
    SurfaceAreasurface area
    SystemicGroupsystemic groups
    Tributariestributaries
    TypicalMorphologytypical morphology
    TypicalNumbertypical number in the human body
    UMLSConceptIDUMLS concept ID
    VenousDrainagevenous drainage
    VenousSourcevenous source
    Volumevolume
    WeightPercentageOfTotalBodyweight percentage of total body
    Widthwidth

Details

  • "AnatomicalStructure" entities include body systems and organs, as well as individual skeletal structures, muscles, nerves and blood vessels.
  • "AnatomicalStructure" entity classes encompass organs and tissues that are structurally or functionally associated.
  • Some properties are available for the "AnatomicalStructure" entity type as a whole and can be given using the form EntityValue["AnatomicalStructure",property]. Such properties include:
  • "Properties"the list of available properties
    "PropertyCanonicalNames"the standard names of available properties
    "SampleEntities"a sample list of available entities (typically of length 10)
    "SampleEntityClasses"a sample list of available entity classes (typically of length 10)
    "EntityCount"number of entities available
    "Entities"the list of available entities
    "EntityCanonicalNames"the standard names of available entities
    "EntityClasses"the list of available entity classes
    "EntityClassCanonicalNames"the standard names of available entity classes
    "PropertyClasses"the list of available property classes
    "PropertyClassCanonicalNames"the standard names of available property classes
    "PropertyCount"number of properties available
  • The following annotations can be used in the third argument of EntityValue["AnatomicalStructure",property,annotation]:
  • "Source"source information for the property
    "Date"the date associated with the entity-property value (if any)
    "EntityAssociation"an association of entities and entity-property values
    "PropertyAssociation"an association of properties and entity-property values
    "EntityPropertyAssociation"an association in which the specified entities are keys, and values are a nested association of properties and entity-property values
    "PropertyEntityAssociation"an association in which the specified properties are keys, and values are a nested association of entities and entity-property values
    "Dataset"a dataset in which the specified entities are keys, and values are an association of property names and entity-property values
  • The following annotations can be used in the second argument of EntityValue[property,annotation]:
  • "Qualifiers"the list of possible qualifiers for the property
    "QualifierValues"the list of possible values that can be given to each qualifier
    "DefaultQualifierValues"the list of default values for the property's qualifiers
    "Description"a brief textual description of the property
    "Definition"a detailed textual definition of the property
    "PhysicalQuantity"the physical quantity associated with the entity-property value
    "Unit"the unit associated with the entity-property value
  • A qualifier value of Automatic indicates that an applicable format of values can be used; e.g. for the "Date" qualifier, this includes a proper date or date span.

Examples

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Basic Examples  (6)

Use for entity discovery:

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Find a property value for an entity:

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Retrieve a dataset of all available properties for an entity:

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Find the 10 largest anatomical structures by their weights:

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Find the digestive organs:

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Find the estimated total length of the digestive tract:

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Scope  (7)

Applications  (1)

Relations to Other Entity Types  (3)

Neat Examples  (1)