WOLFRAM SYSTEM MODELER

SubstrateConnector

Connector between substances and reactions (substrate side of reaction)

Wolfram Language

In[1]:=
SystemModel["BioChem.Interfaces.Nodes.SubstrateConnector"]
Out[1]:=

Information

A connector between substances and reactions, on the substrate side of a reaction. The connector has the volume variable defined as input, and should only be connected to a SubstanceConnector (if they are in the same level of the hirearchy).

Connector Variables (2)

c

Causality: None

Type: Concentration (mol/l)

Description: Used in substances to describe the substance concentration

V

Causality: Input

Type: Volume (l)

Description: Used to describe compartment volume

Flow Variables (1)

r

Type: MolarFlowRate (mol/s)

Description: Used in substances to describe the net flow rate of substance into a substance node

Used in Components (12)

Mitochondria

BioChem.Examples.CentralMetabolism

Mitochondria compartment

Kidneys

BioChem.Examples.MealSimulation.Modules

Kidney module describing glucose excretion

OneSubstrate

BioChem.Interfaces.Reactions.Basics

SubstanceConnector for one substrate

OneSubstrateReversible

BioChem.Interfaces.Reactions.Basics

SubstanceConnectors for one substrate in a reversible reaction

TwoSubstrates

BioChem.Interfaces.Reactions.Basics

SubstanceConnectors for two substrates

TwoSubstratesReversible

BioChem.Interfaces.Reactions.Basics

SubstanceConnectors for two substrates in a reversible reaction

ThreeSubstrates

BioChem.Interfaces.Reactions.Basics

SubstanceConnectors for three substrates

ThreeSubstratesReversible

BioChem.Interfaces.Reactions.Basics

SubstanceConnectors for three substrates in a reversible reaction

FourSubstrates

BioChem.Interfaces.Reactions.Basics

SubstanceConnectors for four substrates

FourSubstratesReversible

BioChem.Interfaces.Reactions.Basics

SubstanceConnectors for four substrates in a reversible reaction

MultipleSubstrates

BioChem.Interfaces.Reactions.Basics

SubstanceConnector for arbitrary number of substrates

MultipleSubstratesReversible

BioChem.Interfaces.Reactions.Basics

SubstanceConnector for arbitrary number of substrates in a reversible reaction