WOLFRAM SYSTEM MODELER

SubstanceConnector

Connector between substances and reactions

Wolfram Language

In[1]:=
SystemModel["BioChem.Interfaces.Nodes.SubstanceConnector"]
Out[1]:=

Information

A connector between substances and reactions. The connector has the volume variable defined as output, and can only be connected to the other Nodes.

Connector Variables (2)

c

Causality: None

Type: Concentration (mol/l)

Description: Used in substances to describe the substance concentration

V

Causality: Output

Type: Volume (l)

Description: Used to describe compartment volume

Flow Variables (1)

r

Type: MolarFlowRate (mol/s)

Description: Used in substances to describe the net flow rate of substance into a substance node

Used in Components (15)

Endoplasmic_Reticulum

BioChem.Examples.CaOscillations

Endoplasmic reticulum compartment

Cytosol

BioChem.Examples.CentralMetabolism

Cytosolic compartment

Mitochondria

BioChem.Examples.CentralMetabolism

Mitochondria compartment

Nucleus

BioChem.Examples.CircadianOscillator

Nucleus compartment

Cytoplasm

BioChem.Examples.CircadianOscillator

Cytoplasm compartment

LiverInsulin

BioChem.Examples.MealSimulation.Modules

Liver module describing hepatic extraction of insulin

PeripheralTissue

BioChem.Examples.MealSimulation.Modules

Peripheral tissue module describing glucose uptake

PlasmaGlucose

BioChem.Examples.MealSimulation.Modules

Plasma glucose module

PlasmaInsulin

BioChem.Examples.MealSimulation.Modules

Plasma insulin module

PortalVein

BioChem.Examples.MealSimulation.Modules

Portal vein module

Cytosol

BioChem.Examples.YeastGlycolysis

Cytosolic compartment

AmbientSubstance

BioChem.Substances

Substance used as a reservoir in reactions

BoundarySubstance

BioChem.Substances

Substance with a concentration not determined by reactions, but by events

SignalSubstance

BioChem.Substances

Substance with a concentration not determined by reactions, but by external equations

Substance

BioChem.Substances

Standard substance with concentration determined by reactions