WOLFRAM SYSTEM MODELER
NucleusNucleus compartment |
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Diagram
Wolfram Language
In[1]:=
SystemModel["BioChem.Examples.CircadianOscillator.Nucleus"]
Out[1]:=
Information
Nucleus compartment
See also
The Container model for further documentation of the system and simulation results.Parameters (8)
| mainCompartment |
Value: false Type: Boolean Description: Specifies whether the compartment is a main (top-level) compartment. Used in SBML import/export. |
|---|---|
| k3t |
Value: Type: Real |
| k3d |
Value: Type: Real |
| k6t |
Value: Type: Real |
| k6d |
Value: Type: Real |
| k6a |
Value: Type: Real |
| k7a |
Value: Type: Real |
| k7d |
Value: Type: Real |
Connectors (4)
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y3_node |
Type: SubstanceConnector Description: Connector between substances and reactions |
|---|---|---|
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y2_node |
Type: ProductConnector Description: Connector between substances and reactions (product side of reaction) |
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y6_node |
Type: SubstanceConnector Description: Connector between substances and reactions |
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y5_node |
Type: ProductConnector Description: Connector between substances and reactions (product side of reaction) |
Components (11)
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y3 |
Type: y3_ Description: PER2_CRY_complex_nucleus |
|---|---|---|
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y6 |
Type: y6_ Description: BMAL1_nucleus |
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y7 |
Type: y7_ Description: Active BMAL1 |
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per2_cry_nuclear_export |
Type: per2_cry_nuclear_export_ Description: per2_cry_nuclear_export |
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ambientSubstance |
Type: AmbientSubstance Description: Substance used as a reservoir in reactions |
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nuclear_per2_cry_complex_degradation |
Type: nuclear_per2_cry_complex_degradation_ Description: nuclear_per2_cry_complex_degradation |
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BMAL1_nuclear_export |
Type: BMAL1_nuclear_export_ Description: BMAL1_nuclear_export |
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nuclear_BMAL1_degradation |
Type: nuclear_BMAL1_degradation_ Description: nuclear_BMAL1_degradation |
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BMAL1_activation |
Type: BMAL1_activation_ Description: BMAL1_activation |
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BMAL1_deactivation |
Type: BMAL1_deactivation_ Description: BMAL1_deactivation |
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Active_BMAL1_degradation |
Type: Active_BMAL1_degradation_ Description: Active_BMAL1_degradation |
Used in Examples (1)
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BioChem.Examples.CircadianOscillator Main model of the example |