WOLFRAM SYSTEM MODELER

Examples

Package with examples of BioChem models

Package Contents

CaOscillations

A minimal generic model of bacteria-induced intracellular Ca2+ oscillations in epithelial cells (Oxhamre et al., 2005)

CentralMetabolism

A model of the utilization of energy stored in the form of glycogen (Parra et al., 2000)

CellDivision

A mathematical model for the interactions of cdc2 and cyclin (Tyson, 1991)

CircadianOscillator

A model of the mammalian circadian oscillator (Becker-Weimann et al., 2004)

GMO

A minimal cascade model for the miotic oscillator involving cyclin and cdc2 kinase (Goldbeter, 1991)

InsulinSignaling

A model of insulin receptor and insulin receptor substrate 1 phosphorylation (Br´┐Żnnmark et al., 2010)

MealSimulation

A meal simulation model of the glucose insulin system (Nyman et al., 2011)

YeastGlycolysis

A model of glycolysis in Saccharomyces cerevisiae (Hynne et al., 2001)

MichaelisMenten

An enzymatic reaction with Michaelis-Menten kinetics

Information

This package contains several examples of pathways, from basic examples such as an asymmetric reaction with Michaelis-Menten kinetics, to more advanced multi-compartment models.

Wolfram Language

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SystemModel["BioChem.Examples"]
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